Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEKSLLVKAGRKFEDYKGSMNPPVYHSSTILFPTYKDYLDAADGKNIYGVVNDGIARDYSYGSVGTPTVHYFSNALAEIEGRGQALIYPSGLFALTFAILTFARAGSHVLIQDNSYYRLRRFAENELPKRRVEVTFYDP-T-QDIASLIQSNTRLIMIETPGSVTFEVSNIEHIVKIAKEHKIVTVCDNSWATPLLFRPLDYGIDVALYGVTKYIAGHSDLLMGAIIAEGE-VFKLLYEICKNYGVTVQPYDCYLAHRGLRTLGTRMRKHQSTAMKVAKWLEKHSKIKKVLYPALPSHPQHELWKSYFKGASGVFSIVLDREYSCEELSCMVDHMKIFSIGASWGGCDSLILPIDRKSVSRSVMS----SDYSGSFIRIFCGLEDPEDLISDLNAALARLPCLGFQADEVGHDTKRITA |
| 1IBJ Chain:A ((85-463)) | ASVSTLLVNLDNKFD-PFDAMSTPLYQTATFKQPSAIE------------------NGPYDYTRSGNPTRDALESLLAKLDKADRAFCFTSGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTKLDEVAAAIGPQTKLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRGIKTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGSV---ALSKHLVETTKYFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGIEDVDDLISDLDIAFKTFPL----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IBJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -289856 for 3275 contacts (-88.5/contact) +
2D Compatibility (PS) -41158 + (NN) -25169 + (LL) 1764
1D Compatibility (HY) -20000 + (ID) 5950
Total energy: -380369.0 ( -116.14 by residue)
QMean score : 0.571
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