Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIRIIGSVGSGKTTLAKKLSEWYQIDYFETDRIVWKRE--GIEV----R--------RTDIEKIAVLNKIL----QQENWIIEGVHLEAWV-N---ESFDQADVIIFLNLPKKQIRSQLIKRQIKQLLRLE-------A--------------AHYQVKLNMLNKMFYWDDLFDQRTKPLIAEKMAQTP----------TKWLVVTEKTALQEIQKKLLQIISSRDIL |
| 3GMT Chain:A ((9-212)) | MRLILLGAPGAGKGTQANFIKEKFGIPQISTGDMLRAAVKAGTPLGVEAKTYMDEGKLVPDSLIIGLVKERLKEADCANGYLFDGFPRTIAQADAMKEAGVAIDYVLEIDVPFSEIIERMSGRRTHPASGRTYHVKFNPPKVEGKDDVTGEPLVQRDDDKE---ETVKKRLDVYEAQTKPLITYY-GDWARRGAENGLKAPAYRKISG--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GMT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38102 for 997 contacts (-38.2/contact) +
2D Compatibility (PS) -15744 + (NN) -30 + (LL) 2852
1D Compatibility (HY) -2800 + (ID) 1350
Total energy: -55174.0 ( -55.34 by residue)
QMean score : 0.410
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