Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----MNIIIIGAQASGKMTIGQEIAKQ-TGMTLFHNHDSIDFVLRFMPWSPDSIALTESIRFKFFETFAKTGQKMIFTIVIDFNDSRDVVFLEKIQTVFQSHNQEVLFVELETELSERLKRNRTENRLKHKPSKRDIKWSENDICLTMDYAIFNPEVAPEALTYYHKINNTCLTATETAYLIIQKINQIKEKN
1Y63 Chain:A ((6-179))
EQPKGINILITGTPGTGKTSMAEMIAAELDGFQHLEVGKLVKENHFYTETHIIEEKDEDRLLDFMEPIMVSRG-----NHVVDYH-SSELFPERWFHMVVVLHTS-------TEVLFERLTKRQYSEAKRAENMEAEI----------QCICEEEARDAYEDDIVLVRENDTLEQMAATVEEIRERVEVLK---
General information:
TITO was launched using:
RESULT:
Template:
1Y63.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16741 for 1219 contacts (-13.7/contact) +
2D Compatibility (PS) -17238 + (NN) -2844 + (LL) 2444
1D Compatibility (HY) -2000 + (ID) 1350
Total energy: -37729.0 ( -30.95 by residue)
QMean score : 0.266
(partial model without unconserved sides chains):
PDB file :
Tito_1Y63.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Y63-query.scw
PDB file :
Tito_Scwrl_1Y63.pdb
: