Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNIKRHSIFLWLTTSILAILMAVGMTIYFNTYQASPLARRIAKTATNHKNYLLFRSKGKVKANIIFYQGALVEEEAYSQLARDLADKGYNTYILKTPLNLPVLSPHKAKTIINQNHLTN---VYLAGHSLGGVVASQNAKVAPV--------RGLILLASYPSRKSDL-------------------SHKKLRVLSITASNDHILNWEKYEEAKKRLPNSSTFRTIVGGNHSRFGNYGHQKGDGKATLSHKSSEKQLATFISNFIH |
| 1YCD Chain:A ((3-239)) | -----------VQIPKLLFLHGFLQ----NGKVFSEKSSGIRKLLKKANVQCDYIDAPVL------LEKKDLPFEMDDEKWQATLDADVNRAWFYHSEISHELDISEGLKSVVDHIKANGPYDGIVGLSQGAALSSIITNKISELVPDHPQFKVSVVISGYSFTEPDPEHPGELRITEKFRDSFAVKPDMKTKMIFIYGASDQAVPSVRSKYLYDIYLKAQ------NGNKEKVLAYEHPGG--HMVPNKKDIIRPIVEQITSSLQ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1YCD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -64708 for 1636 contacts (-39.6/contact) +
2D Compatibility (PS) -21815 + (NN) -2700 + (LL) 2812
1D Compatibility (HY) 0 + (ID) 1350
Total energy: -87761.0 ( -53.64 by residue)
QMean score : 0.288
|
|
|