Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRALKEDFFLTLTSLKNQFWVYIGTGILIQTLVAYLVKGILSFIFRRILILSNTPAVTKDNWTLLFNHPLALLLFILYIVILIGFIYTEFAIYTIAILKTEFSLSIKKWLTIFPKKIKSLLGPQLIWVSIYLLLTIPLANLGLRSSILEHLKIPDFISGELTKTVFGKIGYSTLLLLICYLNLRLIYFLPLTILTDYNAKEALLESWKLSRGKHQWRLLSKIILTSLFISVIGTVALAVVAGTSSFIDHSGNNFPLQATFYNLLKSILFAVTLLIKCLIISHLLADIKQNKSIVQQWRAWKGVQHKQKFKHIACVILALAIGTTALKNAIALALLQDNISIKKELIAHRGDTSHGVENSIEALKAAHKAKADYSEMDVIMTKDHKLVVIHDDNLKRLSGMN------------KDVSKLTLDQVTKIPIHQ-GR------------------FASHIPSFAEFMKTAQSL------DQKIMIELKPYNQN---LDIYADEFIKEFKELRLS---TKHKVMSLNLTLIEKVEK-KLPQLD----TGYLIPLHWG------------------------TLQN--HNVDFYGIEEFSY-----------NDWIAYLAQEYNKQLYVWTINRDN------LMIRYL-----QSPVNGIITDELNLFKVINKDIKNSPNYYQRALQLIDSEG |
| 1YDY Chain:A ((29-356)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NEKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDNLVVLHDHYLDRVTDVADRFPDRARKDGRYYAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNELEPKMGMELNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKLPEYTPDVNQLYDALYNKAGVNGLFTDFPDKAVKFLN-------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1YDY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -81264 for 1913 contacts (-42.5/contact) +
2D Compatibility (PS) -25448 + (NN) -8302 + (LL) 33304
1D Compatibility (HY) -7600 + (ID) 2600
Total energy: -91910.0 ( -48.04 by residue)
QMean score : 0.354
|
|
|