Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEELFCIGCGARIQTENKDAAGYTPRAALEKGLETGELYCQRCFRLRHYNEITDVHITDDEFLKLLHEVGDSDALVVNVIDIFDFNGS--IIPGLSRFV--AGNDVLLVGNKKDILPKSVKDGKVTQWLTERAHEEGLRPVDVILTSAQNHHAIKDLIDTIEKYRHGRDVYVVGVTNVGKSTLINAIIREITGSRDVITTSRFPGTTLDKIEIPLDDGSYIFDTPGIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNSEQTLFLAGLARFDFISGQKQGFTAYFDNNLNLHRTKLVGADEFYTKHVGKLLTPPTGKEVSDFPKLVRHEFTIKNKMDIVYSGLGWIRVKSEAENPVVVAAWAPEGVAVVLRKALI |
| 1T9H Chain:A ((83-238)) | --------------------------------------------------------------------PICNVDQAVLVFSAVQPSFSTALLDRFLVLVEANDIQPIICITKMDLIEDQDTEDTIQAYAEDYR-NI---GYDVYLTSSKDQDSLADIIPHFQ----DKTTVFAGQSGVGKSSLLNAISP-----------------TRHVELIHT-SGGLVADTPGFSSLEFTDIEEEELGYTFPDIREKSSSCKFRGCLHLKEPKCAVKQAVEDGELKQYRYDHYVEFMTEIKDRKPRY---------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1T9H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -68469 for 1005 contacts (-68.1/contact) +
2D Compatibility (PS) -13805 + (NN) 43 + (LL) 11188
1D Compatibility (HY) -6800 + (ID) 1450
Total energy: -79293.0 ( -78.90 by residue)
QMean score : 0.408
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