Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPKNELNNKLNKLKHVQVYNKIFNMIQDGTYSPGMQLPSEPEL-AGQLNVSRATLRKSLALLQEDHLVKNIRGKGNFIRENSSNLSENGYENRQHPIKTCLTSKITEVELEFRVEVPAEAITASLKQE-TPVVVIADRWYHTDDGPLAYTLSFIPIELISDAEISLHDTKQLLNFIEEGIYQEGISSHSQSHLGYATSGNFSATKYTLSDHGQFILIQETIFKQEKILMCNKHYVPIEHFELSITSH |
3BWG Chain:A ((8-236)) | ---------------QQIATEIETYIEEHQLQQGDKLPVLETLMA-QFEVSKSTITKSLELLEQKGAIFQVRGSGIFVRKHK-------RKGYISLLSNQGDFNVTSKVIELDVRKPTPEAAENLNIGMDEDIYYVKRVRYINGQTLCYEESYYTKSIVTYLNNEIVS-HSIFHYIREGLGLKIGFSDLFLHVGQLNEEEAEYLGLEAGLPKLYIESIFHLTNGQPFDYSKISYNYEQSQFVVQANS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BWG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -84548 for 1559 contacts (-54.2/contact) +
2D Compatibility (PS) -23426 + (NN) -6979 + (LL) 452
1D Compatibility (HY) -7200 + (ID) 1950
Total energy: -123651.0 ( -79.31 by residue)
QMean score : 0.394
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