Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVLLLLAVVIMAFGSIQVQGSLLEFGQMILFKTGKRADVSYGFYGCHCGVGGRGSPKDATDWCCVTHDCCYNRLEKRGCGTKFLTYKFSYRGGQISCSTNQDSCRKQLCQCDKAAAECFARNKKSYSLKYQFYPNKFCKGKTPSC
2G58 Chain:A ((1-119))
---------------------SLLEFGKMILEETGKLAIPSYSSYGCYCGWGGKGTPKDATDRCCFVHDCCYGNL--PDCNPKSDRYKYKRVNGAIVCE-KGTSCENRICECDKAAAICFRQNLNTYSKKYMLYPDFLCKGEL---
General information:
TITO was launched using:
RESULT:
Template:
2G58.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53918 for 880 contacts (-61.3/contact) +
2D Compatibility (PS) -13109 + (NN) -10363 + (LL) 2756
1D Compatibility (HY) -10800 + (ID) 3250
Total energy: -88684.0 ( -100.78 by residue)
QMean score : 0.254
(partial model without unconserved sides chains):
PDB file :
Tito_2G58.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2G58-query.scw
PDB file :
Tito_Scwrl_2G58.pdb
: