Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNSKSFADINLYREQIKRVKDSDDVPMVLVGNKCDLP-TRTVDTKQAHELAKSYGIPFIETSAKTRQGVEDAFYTLVREIRQYRMKKLNSSDDGTQGCMGLPCVVM
1KAO Chain:A ((1-165))
MREYKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYEKVPVILVGNKVDLESEREVSSSEGRALAEEWGCPFMETSAKSKTMVDELFAEIVRQMN-------------------------
General information:
TITO was launched using:
RESULT:
Template:
1KAO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89709 for 1318 contacts (-68.1/contact) +
2D Compatibility (PS) -18502 + (NN) -9613 + (LL) 1140
1D Compatibility (HY) -20400 + (ID) 4050
Total energy: -141134.0 ( -107.08 by residue)
QMean score : 0.612
(partial model without unconserved sides chains):
PDB file :
Tito_1KAO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1KAO-query.scw
PDB file :
Tito_Scwrl_1KAO.pdb
: