Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLSILVAHDLQRVIGFENQLPWHLPNDLKHVKKLSTGHTLVMGRKTFESIGKPLPNRRNVVLTSDTSFNVVGVDVIHSIEDIYQLP---GHVFIFGGQILFEEMIDKVDDMYITVIEGKFRGDTFFPPYTFEDWEVASSVEGKLDEKNTIPHTFLHLIRKK
3S9U Chain:A ((4-165))
MRVSFMVAMDENRVIGKDNNLPWRLPSELQYVKKTTMGHPLIMGRKNYEAIGRPLPGRRNIIVTRNEGYHVEGCEVAHSVEEVFELCKNEEEIFIFGGAQIYDLFLPYVDKLYITKIHHAFEGDTFFPEMDMTNWKEVFVEKGLTDEKNPYTYYYHVYEKQQ
General information:
TITO was launched using:
RESULT:
Template:
3S9U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -119275 for 1173 contacts (-101.7/contact) +
2D Compatibility (PS) -17042 + (NN) -2805 + (LL) 0
1D Compatibility (HY) -15600 + (ID) 3350
Total energy: -158072.0 ( -134.76 by residue)
QMean score : 0.549
(partial model without unconserved sides chains):
PDB file :
Tito_3S9U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3S9U-query.scw
PDB file :
Tito_Scwrl_3S9U.pdb
: