Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDAVSSDRNFPNSTNLPRNPSMADYEARIFTFGTWIYSVNKEQLARAGFYALGEGDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCKYLLEQKGQEYINNIHLTHSLEECLVRTT
2OPZ Chain:D ((1-108))
---------NFPNSTNLPRNPSMADYEARIFTFGTWIYSVNKEQLARAGFYALGEGDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCKYLLEQKGQEYINNIHLTHSLEECLVRTT
General information:
TITO was launched using:
RESULT:
Template:
2OPZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22796 for 738 contacts (-30.9/contact) +
2D Compatibility (PS) -11878 + (NN) -8654 + (LL) 408
1D Compatibility (HY) -14400 + (ID) 5400
Total energy: -62720.0 ( -84.99 by residue)
QMean score : 0.420
(partial model without unconserved sides chains):
PDB file :
Tito_2OPZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OPZ-query.scw
PDB file :
Tito_Scwrl_2OPZ.pdb
: