Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTIPAFHPGELNVYSAPGDVADVSRALRLTGRRVMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNPMQFGAGEDLDAYPRTPDDDLAQLRAEGVEIAFTPTTAAMYPDGL--RTTVQPGPLAAELEGGPRPTHFAGVLTVVLKLLQIVRPDRVFFGEKDYQQLVLIRQLVADFNLDVAVVGVPTVREADGLAMSSRNRYLDPAQRAAAVALSAALTAAAHAATAG---AQAALDAARAVLDAAPGVAVDYLELRDIG-LGPM-PLNGSGRLLVAARLGTTRLLDNIAIEIGTFAGTDRPDGYRAILESHWRN |
| 1IHO Chain:A ((1-282)) | ----------MLIIETLPLLRQQIRRLRMEGKRVALVPTMGNLHDGHMKLVDEAKAR-ADVVVVSIFVNPMQFDRPEDLARYPRTLQEDCEKLNKRKVDLVFAPSVKEIYPNGTETHTYVDVPGLSTMLEGASRPGHFRGVSTIVSKLFNLVQPDIACFGEKDFQQLALIRKMVADMGFDIEIVGVPIMRAKDGLALSSRNGYLTAEQRKIAPGLYKVLSSIADKLQAGERDLDEIITIAGQELNEK-GFRADDIQIRDADTLLEVSETSKRAVILVAAWLGDARLIDNKMVEL---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IHO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -187461 for 2209 contacts (-84.9/contact) +
2D Compatibility (PS) -30598 + (NN) -18642 + (LL) 840
1D Compatibility (HY) -25600 + (ID) 6150
Total energy: -267611.0 ( -121.15 by residue)
QMean score : 0.667
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