Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGAVSCRQGQHTQQGEHTRVAVPHKQGGNIRGPWARGWKSLWTGLGTIRSDLEELWELRGHHYLHQESLKPAPVLVEKPLPEWPVPQFINLFLPEFPIRPIRGQQQLKILGLVAKGSFGTVLKVLDCTQKAVFAVKVVPKVKVLQRDTVRQCKEEVSIQRQINHPFVHSLGDSWQGKRHLFIMCSYCS-TDLYSLWSAVG--CFPEASIRLFAAELVLVLCYLHDLGIMHRDVKMENILLDERGHLKLTDFGLSRHVPQGAQAYTICGTLQYMGERG
2ACX Chain:A ((179-355))
---------------------------------------------------------------------------------------------------QPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEV
General information:
TITO was launched using:
RESULT:
Template:
2ACX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111255 for 1215 contacts (-91.6/contact) +
2D Compatibility (PS) -18910 + (NN) -7282 + (LL) 5644
1D Compatibility (HY) -12400 + (ID) 2700
Total energy: -146903.0 ( -120.91 by residue)
QMean score : 0.453
(partial model without unconserved sides chains):
PDB file :
Tito_2ACX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ACX-query.scw
PDB file :
Tito_Scwrl_2ACX.pdb
: