Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------MLKEFEIEPLLKDK--VPHQTKAVVAMSGGVDSSVAAVLLHRLGYQVIGVTLQLYGADGNSNTRKKGVCCAGQDIYDAKRVAEGTGFPHYILNYEEIFKKEVIESFAQTYIQGKTPIPCIKCNQTVKFRDLLQVTRNLGADVLITGHYVRRLEKNGEVKLCRGIDKSKDQSYFLFATTKEQLKLLRFPLGGFYKCNVRKLARYFSLPISEKPDSQDICFVSENYSKTIAKLAPQSIQKGKIVDVNGKVLGEHNGIVNFTVGQRKGLGIAYSEPLYVVRINTKNNEIVVGPVNALMQRKILVKELNWLEQPKKGMEVTVKLRSLHSGSLAKIYPAKEQ----NKAYVILNDDYFSISPGQACVAYKDEQVIGGGWICS |
| 3VRH Chain:A ((1-309)) | MKCKFCSREAYIKIHYPKMYLCEEHFKEYFERKVSRTIERYKLLTKDERILVAVSGGKDSAVTAYVLKKLGYNIECLHINL-GISGY----------SEKSEEYAKKQCKLIGAPLHIVRIKEILGYGIGE------VKTRRP-PCSYCGL-TKRYIMNKFAYDNGFDAIATGHN------------------LDDEASFLLNNIL--------------HWNTEYLAKGGPILPQQGKFIKKVKPLYEVTEREVVAYALAV-----------------------------GLEYIVEECPY--------------------TTLDMKGVLNELEEKRPGTKFNFVRGYLKKKKLFEPKECKICRMPSSGDICAFCKFWGLKKEINFKVSSTDEEPFG------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VRH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73307 for 2083 contacts (-35.2/contact) +
2D Compatibility (PS) -28190 + (NN) -9981 + (LL) 6452
1D Compatibility (HY) -6000 + (ID) 2950
Total energy: -113976.0 ( -54.72 by residue)
QMean score : 0.338
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