Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIITIFGPPGSGKGTQSSLLIERYNLKLISVGDLLRNIISSGSELGKKIKDTVESGNLIQDGVICELLYDQLALMD--DNFLFDGFPRNLNQAHFLTQILRERYNRDVDIVIELQLNDKVAIDRLKNRLVCLDCKSVY------STSSFKDDNNLVCTRCKSARLEKRIDDSDLSAIDRRIGEYHVQVKSLREYYRDKLLMIDANLNVDQVKQEIESKISCSLV
3TLX Chain:A ((34-238))
----FLGAPGSGKGTQSLNLKKSHCYCHLSTGDLLREAAEKKTELGLKIKNIINEGKLVDDQMVLSLVDEKLKTPQCKKGFILDGYPRNVKQAEDLNKLLQKNQTK-LDGVFYFNVPDEVLVNRISGRLIHKPSGRIYHKIFNPPKVPFRDD-------VTNEPLIQREDDNE-DVLKKRLTVFKSETSPLISYYKNKNLLI--NLDATQPANDLEKKISQHID
General information:
TITO was launched using:
RESULT:
Template:
3TLX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57341 for 1438 contacts (-39.9/contact) +
2D Compatibility (PS) -21157 + (NN) -5507 + (LL) 1252
1D Compatibility (HY) -12400 + (ID) 3350
Total energy: -98503.0 ( -68.50 by residue)
QMean score : 0.428
(partial model without unconserved sides chains):
PDB file :
Tito_3TLX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TLX-query.scw
PDB file :
Tito_Scwrl_3TLX.pdb
: