Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDFAVRYK---ITIEYNGSSFSGWQKQQHSANSIQETIENAIFNFSGEKVTLHCGGRTDAGV--HALGQ-------------VAHFDMERKFELYKIRNAINYHLKSIPIVVLNAETVDNTFHSRFS-AKKRYYEYRIINRYAPA----ALEAGY-AWQVFNPLDVNIMREAAKYLLGKHNLLSFRSKDCQATNPIRTIDDIDIVQNGSHI----------YIKISAISFLHNQVRIIVGTLVEFGKSRTNPQKMLNILNQCKRNAAGVTAPPFGLYLAKIDY------------------ |
| 3VRH Chain:A ((1-309)) | MKCKFCSREAYIKIHYPKMYLCEEHFKEYFERKVSRTIERYKLLTKDERILVAVSGGKDSAVTAYVLKKLGYNIECLHINLGISGYSEKSEEYAKKQCKLIGAPLHIVRIKEILGYGIGEVKTRRPPCSYCGLTKRYIMNKFAYDNGFDAIATGHNLDDEASFLLNNILHWNTEYLAKGGPILPQQGKFIKKVKPLYEVTEREVVAYALAVGLEYIVEECPYTTLDMKGVLNELEEKRPGTKFNFVRGYLKKKKLFE-PKECKI--CRMPSSGDICAFCKFWGLKKEINFKVSSTDEEPFG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VRH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29651 for 1723 contacts (-17.2/contact) +
2D Compatibility (PS) -25003 + (NN) 6140 + (LL) 268
1D Compatibility (HY) -7600 + (ID) 2000
Total energy: -57846.0 ( -33.57 by residue)
QMean score : 0.047
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