Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTGVVFSGTQPSGVLHLGNYLGAIKQWVTLQDKYKSIFCIVDLYAITANKLSASELKSNIFKTAAAYIACGIDPEKSIIFNQSTISSHTELSWLLGCYTPVGWLNRMTQFKDKAGSDKQKASLGLYSYPVLMAADILLYRTKY----VPVGDDQKQHLELARDIALAFNNHYKLGHFVIPEILVLDHASRIMSLRDGTSKMSKSPPSEYSCINLDDTDDLIVKKVGKAKTDSILGFDFATLKCRPEISNLINIYSVLSNLDVDKVCEEMNKYDMQHFKGELADLIISVISPIREEINDLLKDQSHLYRVLKKGTEKAAEIVGHNIKEIKNIIGFVQ
1D2R Chain:A ((1-326))-MKTIFSGIQPSGVITIGNYIGALRQFVELQHEYNCYFCIVDQHAITV-WQDPHELRQNIRRLAALYLAVGIDPTQATLFIQSEVPAHAQAAWMLQCIVYIGELERMTQFKEKS-AGAAAAAAGLLTYPPLMAADILLY----NTDIVPVGEDQKQHIELTRDLAERFNKRYG-ELFTIPEARIPKVGARIMSLVDPTKKMSKSDPNPKAYITLLDDAKTIEKKIKSAVTDSEGTIRYDKEA-KPGISNLLNIYSTLSGQSIEELERQYEGKGYGVFKADLAQVVIETLRPIQERYHHWMESE-ELDRVLDEGAEKANRVASEMVRKMEQAMGLGR


General information:
TITO was launched using:
RESULT:

Template: 1D2R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -209063 for 2559 contacts (-81.7/contact) +
2D Compatibility (PS) -34078 + (NN) -15533 + (LL) 468
1D Compatibility (HY) -25600 + (ID) 7000
Total energy: -290806.0 ( -113.64 by residue)
QMean score : 0.535

(partial model without unconserved sides chains):
PDB file : Tito_1D2R.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1D2R-query.scw
PDB file : Tito_Scwrl_1D2R.pdb: