Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGSPEFAINALNSLLKSKNEVVAVYTKAPKPSGRGQKLTKSPVHIIAEESGIEVCTPTSLKPLVEQEKFKKFKPDVAVVAAYGLILPKEILNILKYSCINIHPSLLPRWRGAAPIQHTILAGDRKTGISIMQLDGGLDSGPILKQKKFLVEKNDNYKTLHDKLSKLGSNLLMEVIDEIEK--HPPLEQSDDGACYADKIED--YKIYASDICEVAYRKVKAFYPKA--FVKIEHKRVRILDADFEVDASLTSGQGKII---NDNMHISLKSGTLIPKIVQMEGRNSCNIKDFVRGLK--FSMVKKFIE |
| 3Q0I Chain:A ((13-317)) | AGTPDFAARHLAALLSSEHEIIAVYTQPE---------TASPVKTLALEHNVPVYQPENFKSDESKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILPRWRGAAPIQRSIWAGDSETGVTIMQMDVGLDTGDMLKIATLPIEASDTSASMYDKLAELGPQALLECLQDIAQGTAVAVKQDDGLANYAHKLSKEEARINWSDAATHIERCIRAFNPWPMSHFEVAENSIKVWQARVETRA-VTQTPGTIIQADKSGIYVATGQDVLVLESLQIPGKKALPVQDILNARADWFSVGSQLS- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3Q0I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -157024 for 2250 contacts (-69.8/contact) +
2D Compatibility (PS) -30488 + (NN) -7495 + (LL) 188
1D Compatibility (HY) -22400 + (ID) 5100
Total energy: -222319.0 ( -98.81 by residue)
QMean score : 0.519
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