Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIERTLSILKPDTVKNNIIGNINSYIEKSGLRIIAQKMMLLTKKQAELFYAIHKDRPFFGGLVEFMTSGPVIVQVLVGENAISKYRQIMGATDPKQADKGTIRGDFADDVNENRVHGSDSLENAHKEIAFFFAECELV
1B99 Chain:F ((9-144))
---ERTFLAVKPDGVARGLVGEIIARYEKKGFVLVGLKQLVPTKDLAESHYAEHKERPFFGGLVSFITSGPVVAMVFEGKGVVASARLMIGVTNPLASAPGSIRGDFGVDVGRNIIHGSDSVESANREIALWFKPEELL
General information:
TITO was launched using:
RESULT:
Template:
1B99.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62217 for 1043 contacts (-59.7/contact) +
2D Compatibility (PS) -14468 + (NN) -2704 + (LL) 556
1D Compatibility (HY) -10400 + (ID) 3150
Total energy: -92383.0 ( -88.57 by residue)
QMean score : 0.487
(partial model without unconserved sides chains):
PDB file :
Tito_1B99.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B99-query.scw
PDB file :
Tito_Scwrl_1B99.pdb
: