Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMLDKENPIIKEFEEAGAILHGHFVLSSGLHSDTYTQCAKIFENPSRAMKVCELLANKIKKELNSSIDLILSPAIGGIIVGYEIGRQLRMKTMFCER-VNGK----------------FELRRGFEIKRGEKILLVEDVITTGKSSLEAVKCAEDMGGKVVAEASLIKRNSET-KLPFSIISLLELSIKNYSEAELPEELKKLPIIKPGSREYLSNCSK
1O57 Chain:A ((101-254))
---------------------------------GYVYLTDILGKPSVLSKVGKLFASVFAE---REIDVVMTVATKGIPLAYAAASYLNVPVVIVRKD--GSTVSINYVSGSSNRIQTMSLAKR-SMKTGSNVLIIDDFMKAGGTINGMINLLDEFNANVAGIGVLVEAEGVDERLVDEYMSLLTLSTINMKEKSIEIQNGNFLRFFKDN---------
General information:
TITO was launched using:
RESULT:
Template:
1O57.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91560 for 1037 contacts (-88.3/contact) +
2D Compatibility (PS) -13605 + (NN) 633 + (LL) 3060
1D Compatibility (HY) -12800 + (ID) 1500
Total energy: -115772.0 ( -111.64 by residue)
QMean score : 0.494
(partial model without unconserved sides chains):
PDB file :
Tito_1O57.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1O57-query.scw
PDB file :
Tito_Scwrl_1O57.pdb
: