Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLNLESLPKHLAIIMDGNSRWANSQGRVKIDGYRKGSEVAYDIAKHCIALAIPYLTLYAFSMENWLRPKEETDCLFDLFYSILTDRDKVNFFHNYNIKLNFVGNLSLLPGKILNQIKESEEMTRKNDGLLLTVAVSYGAKQEIIHAVRNITRKNIDCVSEDEFEKFLYTKDLP-KLDLLIRTGGEKRLSNFLLWQAAYAELYFCDTLWPDFSCQDLSKALEDYTKREKRYGR
3UGS Chain:B ((8-225))
--------KHLAVVMDGNR--------------SQGVKTMQKLMEVCMEENISNLSLFAFSTENWKRPKDEIDFIFELLDRCLD--EALEKFEKNNVRLRAIGDLSRLEDKVREKITLVEEKTKHCDALCVNLAISYGARDEIIRAAKRVIEKKLELNEENLTQNL----DLPLDVDLMLRVGNAKRLSNFLLWQCSYAEIYFSETLFPSLTKREFKRIIKEFRNRERTFGK
General information:
TITO was launched using:
RESULT:
Template:
3UGS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -117338 for 1482 contacts (-79.2/contact) +
2D Compatibility (PS) -22000 + (NN) -6664 + (LL) 1644
1D Compatibility (HY) -17600 + (ID) 4000
Total energy: -165958.0 ( -111.98 by residue)
QMean score : 0.471
(partial model without unconserved sides chains):
PDB file :
Tito_3UGS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UGS-query.scw
PDB file :
Tito_Scwrl_3UGS.pdb
: