Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKHYQIVIIGGGTAGVTVASRLLRKNQNLKEKIAII-DPADHHYYQPLWTLVGAGVSSLKSSRKDMESVIPEGANWIKQAVSSFQPENNSVILGDNTVVYYDFLVVAPGLQINWSSIKGLKENIGKNGVCSNYSPDYVNETWNQISNFKQGNAIFTHPNTPIKCGGAPMKIMYLAEDYFRKHKIRSNANVIYATPKDALFD---VGKYNKELERIVEERNITVNYNYNLVEIDGDKKVATFEHIKAYDRKTISYDMLHVTPPMGP-LDVVKESTLSDSEGWVDVNPTTLQHKSYSNVFALGDASNVPTSKTGAAIRKQAPIVANNLLQVMNNQMLTHHYDGYTSCPIVTGYN---RLILAEFDYNKNTKETMPFNQAKERRSMYIFKKDLLPKMYWYGMLKGLI------------------------------ |
| 1D7Y Chain:A ((5-405)) | -ALKAPVVVLGAGLASVSFVAELRQAG--YQGLITVVGDEAERPYDRPPLSKDFMAHGDAEKIRLDCKRA-PEVEWLLGVTAQSFDPQAHTVALSDGRTLPYGTLVLATGAAPRALPTLQ-----------GATMPVHTLRTLEDARRIQAG----LRPQSRLLIVGGGVIGLELAATARTA-----GVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRFERSVTGSVDG-------VVLLDDGTRIAADMVVVGIGVLANDALARAAGLACDDG---IFVDAYGRTTCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLVDPTAPGYAELPWYWSDQGALRIQVAGLASGDEEIVRGEVSLDAPKFTLIELQKGRIVGATCVNNARDFAPLRRLLAVGAKPDRAALADPATDLRKLAAA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1D7Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140483 for 3071 contacts (-45.7/contact) +
2D Compatibility (PS) -39718 + (NN) -15901 + (LL) 2616
1D Compatibility (HY) -7600 + (ID) 2900
Total energy: -203986.0 ( -66.42 by residue)
QMean score : 0.359
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