Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------MKKKNIYSIRKLGVGIASVTLG-------------TLLISGGVTPAANAAQHDEAQQNAFYQVLNMP----NLNADQRNGFIQSL--KD------------DPSQSANVLG------EAQKLNDSQAPKA----------DAQQNNFNKDQQSAFYEI--LNMPNLNEAQRNGFIQSLK----------------------DDPSQSTNVLGEAKKLNESQAPKA-DNNFNKEQQNAFYEIL----NMPNLN-EEQRNGFIQSLKDDPSQSANLLSEAKKLNESQAPKADNKFNKEQQNAF----------------------------YEILHLPNLNEEQRNGFIQSLK-------DDPSVSKEILAEA------KKLNDAQAPKEEDNKKPGKEDGNKPGKEDGNK--------------------PGKEDNKKPGKEDGNKPGKEDNNKPGKEDGNKPGKEDNNKPGKEDGNKPGKEDGNKPGKEDGNGVHVVKPGDTVNDIAKANGTTADKIAADNKLADKNMIKPGQELVVDKKQPANHADANKAQALPETGEENPFIGTTVFGGLSLALGAALLAGRRREL- |
| 4XVK Chain:A ((1-666)) | KKHFCDIRHLDDWAKSQLIEMLKQAAALVITVMYTDGSTQLGADQTPVSSVRGIVVLVKRQACGPVLEGFVSDDPCIYIQIEHSAIWDQEQEAHQQFARNVLFQTMKCKCPVICFNAKDFVRIVLQFFGNDGSWKHVADFIGLDPRIAAWLIDPSDATPSFEDLVEKYCEKSITVKVNSTYGNSSRNIVNQNVRENLKTLYRLTMDLCSKLKDYGLWQLFRTLELPLIPILAVMESHAIQVNKEEMEKTSALLGARLKELEQEAHFVAGERFLITSNNQLREILFGKLKLHLLSYPSTSEAVLNALRD-LHPLPKIILEYRQVHKIKSTFVDGLLACMKKGSISSTWNQTGTVTGRLSAKHPNIQGISKHPIQITTPKKILTISPRAMFVSSKGHTFLAADFSQIELRILTHLSGDPELLKLDDVFSTLTSQWKDVPVEQVTHADREQTKKVVYAVVYGAGKERLAACLGVPIQEAAQFLESFLQKYKKIKDFARAAIAQCHQTGCVVSIMGRRRPLPRIHAHDQQLRAQAERQAVNFVVQGSAADLCKLAMIHVFTAVAASHTLTARLVAQIHDELLFEVEDPQIPECAALVRRTMESLEQVQALELQLQVPLKVSLSAGRSWGHLVPLQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XVK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 200481 for 2826 contacts (70.9/contact) +
2D Compatibility (PS) -46392 + (NN) -5973 + (LL) -76
1D Compatibility (HY) -20000 + (ID) 3650
Total energy: 124390.0 ( 44.02 by residue)
QMean score : 0.186
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