Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MKIIYCITK--ADNGGAQTHLIQLANHFCVHHDVYVIVGNHGPMIEQLDARVNVIILEHLVGPIDFKQDILAVKVLAQLFSKIKPDVIHLHSSKAGTVGRIAKFISKSKDTRVVFTAHGWAFTEGVKPAKKFLYLVIEKLMSCITDSIICVSDFDKQLALKYRFNRLKLTTIHNGI--ADVPAVKQTLKSQSHNNIGEVVGMLPNKQDLQINAPTKHQFVMIARFAYPKLPQNLIAAIEILKLHNSNHAHFTFIGDGPTLNDCQQQVVQAGLENDVTFLGNV--INASHLLSQYDTFILISK-------HEGLPISIIEAMATGLPVIASHVGGISELVADN-GICMMNNQPETIAKVLEKYLIDSDYIK-MSNQSRKRYLECFTEEKMIKEVEDVYNGKSTQ |
| 3OKP Chain:A ((4-381)) | SRKTLVVTNDFPPRIGGIQSYLRDFIATQDPESIVVFASTQNAEEAHAYDKTLDYEVIRWPRSV--MLPTPTTAHAMAEIIREREIDNVWFGA--AAPLALMAGTAKQAGASKVIASTHGHEVGWSMLPGSRQSLRKIGTE----VDVLTYISQYTLRRFKSAFGSHPTFEHLPSGVDVKRFTPATPEDKSATRKKLG--------------FTDTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPD-AQLLIVGSGRYESTLRRLA--TDVSQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVTPATGLVVEGSDVDKLSELLIELLDDPIRRAAMGAAGRAHVEAEWSWEIMGERLTNILQSEPR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OKP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -267432 for 3095 contacts (-86.4/contact) +
2D Compatibility (PS) -39676 + (NN) -17643 + (LL) 2168
1D Compatibility (HY) -6800 + (ID) 3100
Total energy: -332483.0 ( -107.43 by residue)
QMean score : 0.509
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