Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIELKNVYRTFKNGDKNIRVLKDINIHINAGEFIAIMGPSGSGKSTLINILGFIDREYHGEYLFEGSNYQTQSDNQLANIRNKTVGFVFQNFKLIHNNTILENISMPLVYTNMNTIERKNKVMTVLSAVGLDGKGDFTP--------------SKLSGGQQQRVAIARAIINNPKFIIADEPTGALDSDTSKIIMDIFTSLNRDNHTTIILVTHDRKVAEKADRIIHILDGRI----QHEEVIK
3B5J Chain:A ((20-227))-------------------ILDNINLSIKQGEVIGIVGRAGSGKSTLTKLIQRFYIPENGQVLIDGHDLALADPNWL----RRQVGVVLQDNVLL-NRSIIDNIS--LANPGMS-------VEKVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHVIMRNMHKICKGR--TVIIIAHRLSTVKNADRIIVMEKGKIVEQGKHKELL-


General information:
TITO was launched using:
RESULT:

Template: 3B5J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -100680 for 1429 contacts (-70.5/contact) +
2D Compatibility (PS) -19637 + (NN) 682 + (LL) 2416
1D Compatibility (HY) -18800 + (ID) 3850
Total energy: -139869.0 ( -97.88 by residue)
QMean score : 0.446

(partial model without unconserved sides chains):
PDB file : Tito_3B5J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3B5J-query.scw
PDB file : Tito_Scwrl_3B5J.pdb: