Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYRYKPLLQSIHLPNGIKISNRFVLSPMTVNASTKEGYITKADLAYAARRSNSAGMQVTGAAYIEPYGKLFEYGFNIDHDACIPGLTNMASTMKQHGSLAIIQLAHAGRFSNQAILN-FGKVYGPSPMTLH-----------SPIEHVVIAMSHEKINSIIQQYRDATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFILGFRATPEET-RGSDLGYTIDEFNQLIDWVMDVS------NIQYLAIASWGRHIYQNTSR---TPGDHFGRPVNQIVYEHLAGRIPLIASGGINSPESALDALQ-H-ADMVGMSSPFVTEPDFVHKLAEQRPHDINLEFSMADLEDLAIPHAAFKDIVKMMDYGEGLKKHTRDALRQLEQNYHDSSS |
| 2HSA Chain:B ((17-366)) | -----PLFSPYKM-GKFNLSHRVVLAPMTRCRA-LNNIPQAALGEYYEQRATAGGFLITEGTMISPTSAGFPHVPGIFTKEQVREWKKIVDVVHAKGAVIFCQLWHVGRASHEVYQPAGAAPISSTEKPISNRWRILMPDGTHGIYPKPRAIGTYEISQVVEDYRRSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGG-SLANRCKFITQVVQAVVSAIG----AD-RVGVRVSPAIDHLDAMDSNPLSLGLAVVERLNK-IQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEA-RLMRTLRNAY--QGTFICSGGY-TRELGIEAVAQGDADLVSYGRLFISNPDLVMRIKLNAP------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HSA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -209657 for 2871 contacts (-73.0/contact) +
2D Compatibility (PS) -33956 + (NN) -3794 + (LL) 4584
1D Compatibility (HY) -19200 + (ID) 3950
Total energy: -265973.0 ( -92.64 by residue)
QMean score : 0.472
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