Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITYDLIGNTPLVLLEHYSDD---KVKIYAKLEQWNPGGSVKDRLGKYLVEKAIQEGRVRAGQTIVEATAGNTGIGLAIAANRHHLKCKIFAPYGFSEEKINIMIALGADVSRTSQSEGMHGAQ----LAARSYAEKYGAVYMNQFESEHNPDTYFHTLGPELTSAL-QQIDYFVAGIGSGGTFTGTARYLKQHHVQC--YAVEPEGSV------LNGGPAHAHDTEGIGSEKWPIFLERRLVDGIFTIKDQDAFRNVKSLAINEGLLVGSSSGAALQGALNLKAQLSEGT-IVVVFPDGSDRYMSKQIFNYEENDYE |
| 3PC3 Chain:A ((56-358)) | ----EVIGCTPLVKLNNIPASDGIECEMYAKCEFLNPGGSVKDRIGYRMVQDAEEQGLLKPGYTIIEPTSGNTGIGLAMACAVKGYKCIIVMPEKMSNEKVSALRTLGAKIIRTPTEAAYDSPEGLIYVAQQLQRETPNSIVLDQYRNAGNPLAHYDGTAAEILWQLDNKVDMIVVSAGTAGTISGIGRKIKEQVPSCQIVGVDPYGSILARPAELNKTDVQFYEVEGIGYDFPPTVFDDTVVDVWTKIGDSDCFPMSRRLNAEEGLLCGGSSGGAMHAALEHARKLKKGQRCVVILPDGIRNYMTK----------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3PC3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -61166 for 2631 contacts (-23.2/contact) +
2D Compatibility (PS) -30956 + (NN) -8640 + (LL) 1272
1D Compatibility (HY) -21200 + (ID) 5250
Total energy: -125940.0 ( -47.87 by residue)
QMean score : 0.393
|
|
|