Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVLNLGSKKQASFYVACELYKEMAFNQHCKLGLATGGTMTDLYEQLVKLLNKNQLNVDNVSTFNLDEYVGLTASHPQSYHYYMDDMLFKQYPYFNRKNIHIPNGDADDMNAEASKYNDVLEQQGQRDIQILGIGENGHIGFNEPGTPFDSVTHIVDLTESTI-KANSRYFKNEDDVPKQAISMGLANILQAKRIILLAFGEKKRAAITHLLNQEISVDVPATLLHKHPNVEIYLDDEACPKNVAKIHVDEMD
2RI0 Chain:A ((2-234))
MKTIKVKNKTEGSKVAFRMLEEEITF-GAKTLGLATGSTPLELYKEIRES----HLDFSDMVSINLDEYVGLSADDKQSYAYFMKQNLFAAK-PFKKSYLPNGLAA--DLAKETEYYDQILAQ-YPIDLQILGIGRNAHIGFNEPGTAFSSQTHLVDLTPSTIAAN-SRFFEKAEDVPKQAISMGLASIMSAKMILLMAFGEEKAEAVAAMVKGPVTEEIPASILQTHPKVILIVDEKAGAGI----------
General information:
TITO was launched using:
RESULT:
Template:
2RI0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -132310 for 1965 contacts (-67.3/contact) +
2D Compatibility (PS) -24968 + (NN) -12499 + (LL) 968
1D Compatibility (HY) -20400 + (ID) 5050
Total energy: -194259.0 ( -98.86 by residue)
QMean score : 0.592
(partial model without unconserved sides chains):
PDB file :
Tito_2RI0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RI0-query.scw
PDB file :
Tito_Scwrl_2RI0.pdb
: