Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNTFLICDECQAVNIRTLQKKLEKLDPDAEIVIGCQSYCGPGRRKTFTFVNNRPLAALTEEELI-EKVSQQLKKPRDPEEEERLRKRHEERKRRKEEQDRKLKEKLEKRKAQQ
3NG1 Chain:B ((122-177))
--------------------------------------YKGKGRRPLLVAADTQRPAAREQLRLLGEKVGVPVLEVMDGESPESIRRRVEEKAR--------------------
General information:
TITO was launched using:
RESULT:
Template:
3NG1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 17612 for 299 contacts (58.9/contact) +
2D Compatibility (PS) -6344 + (NN) -6509 + (LL) 4984
1D Compatibility (HY) -800 + (ID) 950
Total energy: 7993.0 ( 26.73 by residue)
QMean score : 0.202
(partial model without unconserved sides chains):
PDB file :
Tito_3NG1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NG1-query.scw
PDB file :
Tito_Scwrl_3NG1.pdb
: