Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTHVEV-----------VATIAPQLSIEETLIQKINHRIDAIDVLELRIDQIENV-TVDQVAEMITKLKVMQDSFKLLVTYRTKLQGGYGQFINDLYLNLISDLANINGIDMIDIEWQADIDIEKHQRIIKHLQQYNKEVVISHHNFESTPPLDELQFIFFKMQKFNPEYVKLAVMPHNKNDVLNLLQAMSTFSD-TMDCKVVGISMSKLGLISRTAQGVFGGALTYGCIGEPQAPGQIDVTDLKAQVTLY---
1QFE Chain:A ((1-252))
MKTVTVKNLIIGEGMPKIIVSLMGRDINSVKAEALAYREATFDILEWRVDHFMDIASTQSVLTAARVIRDAMPDIPLLFTFRSAKEGGEQTITTQHYLTLNRAAIDSGLVDMIDLE--LFTGDADVKATVDYAHAHNVYVVMSNHDFHQTPSAEEMVSRLRKMQALGADIPKIAVMPQSKHDVLTLLTATLEMQQHYADRPVITMSMAKEGVISRLAGEVFGSAATFGAVKQASAPGQIAVNDLRSVLMILHNA
General information:
TITO was launched using:
RESULT:
Template:
1QFE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -133902 for 1998 contacts (-67.0/contact) +
2D Compatibility (PS) -25840 + (NN) -15214 + (LL) 276
1D Compatibility (HY) -11600 + (ID) 3650
Total energy: -189930.0 ( -95.06 by residue)
QMean score : 0.477
(partial model without unconserved sides chains):
PDB file :
Tito_1QFE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QFE-query.scw
PDB file :
Tito_Scwrl_1QFE.pdb
: