Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEVKTFYNGNTMPQIGLGTFRVENDENCMESVKYAIEQGYRSIDTAKVYGNEEQVGAGIRAGLESTGIAREDLFITSKLYFEDFGRENVAAAYEASLSRLGLKYLDLYLVHWPG------------------TNEAVMVDTWKGMEDLYKNNKAKNIGVSNFEPEHLEALLAQVSI--KPVINQVEYHPYLTQHKLKLYLAAQHIVMESWSPL----------MNAQILNDETIKDIAQELGKSPAQVVLRWNVQHGVVIIPKSVTPNRISENFQIFDFELSDEQMTRIDGLNQDKRIGPDPKTFEG |
| 1FRB Chain:A ((12-303)) | -----------MPIVGLGTWKSPPNQ-VKEAVKAAIDAGYRHIDCAYAYCNENEVGEAIQEKIKEKAVQREDLFIVSKLWPTCFEKKLLKEAFQKTLTDLKLDYLDLYLIHWPQGLQPGKELFPKDDQGRILTSKTTFLEAWEGMEELVDQGLVKALGVSNFNHFQIERLLNKPGLKHKPVTNQVECHPYLTQEKLIQYCHSKGISVTAYSPLGSPDRPSAKPEDPSLLEDPKIKEIAAKHEKTSAQVLIRFHIQRNVVVIPKSVTPSRIQENIQVFDFQLSDEEMATILSFNRNWRACLLPET--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FRB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -113079 for 2164 contacts (-52.3/contact) +
2D Compatibility (PS) -28282 + (NN) -12759 + (LL) 548
1D Compatibility (HY) -26800 + (ID) 6000
Total energy: -186372.0 ( -86.12 by residue)
QMean score : 0.408
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