Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKLIFLIVIALVLSACNSNSSHAKELNDLEKKYNAHIGVYALDTKSGKEVKFNSDKRFAYASTSKAINSAILLEQVPYNK--LNKKVHINKDDIVAYSPILEKYVGKDITLKELIEASMTYSDNTANNKIIKEIGGIKKVKQRLKELGDKVTNPVRYEIELNYYSPKSKKDTSTPAAFGKTLNKLIANGKLSKKNKNFLLDLMFNNKNGDTLIKDGVPKDYKVADKSGQAITYASRNDVAFVYPKGQSEPIVLVIFTNKDNKSDKPNDKLISETAKSVMKEF |
| 3W4P Chain:A ((9-265)) | ------------------------RQLRELESTFDGRLGFVALDTATGARIAHRGDERFPFCSTSKMMLCAAVLARSAGEPALLQRRIAYAKGDLIRYSPITEQHVGAGMSVAELCAATLQYSDNTAANLLIALLGGPQTVTAYARSIGDATFRLDRREPELNTALPGDERDTTTPAAMAASVHRLLVGDALGAAQRAQLNAWMLGNKTGDARIRAGVPADWRVADKTGTG-DYGTANDIGVAYPPNRA-PIVFIVYTTMRNPNAQARDDVIASATRIAARAF |
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General information:
TITO was launched using:
| RESULT:
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Template: 3W4P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -40530 for 2280 contacts (-17.8/contact) +
2D Compatibility (PS) -27655 + (NN) -13300 + (LL) 2736
1D Compatibility (HY) -15600 + (ID) 4350
Total energy: -98699.0 ( -43.29 by residue)
QMean score : 0.820
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