Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVFFHKKIILNFIYSLMVAFLFHLSYGVLLKADGMAKKQTLLVGERLVWDKLTLLGFLEKNHIPQKLYYNLSSQDKELSAEIQSNVTYYTLRDANNTLIQALI-PISQDLQIHIYKKGEDYFLDFIPIVFTRKERTLLLSLQTSPYQDIVKATNDPLLANQLMNAYKKSVPFKRLVKNDKIAIVYTRDYRVGQAFGQPTIKMAMVSSRLHQYYLFSHSNG---RYYDSKAQEVAGFLLETPVKYTRISSPFSYGRFHPVLKVKRPHYGVDYAAKHGSLIHSASDGRVGFIGVKAGYGKVVEI-HLNELRLVYAHMSAFANGLKKGSFVKKGQIIGRVGSTGLSTGPHLHFGVYKNSRPINPLGYIRTAKSKLHGKQREVFLEKAQYSKQKLEELFKTHSFEKNSFYLLEGF |
| 3SLU Chain:A ((8-371)) | ------------------------------------GVQTAYWVQEAVQPGDSLADVLARSGMARDEIARITEKYRHLRAD--QSVHVLVGGDGGAREVQFFTDEDGERNLVALEKKGGIWRRSASEADMKVLPTLRSVVVKTSARGSLARAEVPVEIRESLSGIFAGRFSLDGLKEGDAVRLIYDSLYFHGQQVAAGDILAAEVVKGGTRHQAFYYRSDKGGNYYDEDGRVLQGFN-IEPLVYTRISSPFG-YRMHPILHTWRLHTGIDYAAPQGTPVRASADGVITFKGRKGGYGNAVMIRHANGVETLYAHLSAFSQA---QGNVRGGEVIGFVGSTGRSTGPHLHYEARINGQPVNPVS-VALPTPELTQADKAAFAAQKQKADALLARLR---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SLU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -122932 for 2748 contacts (-44.7/contact) +
2D Compatibility (PS) -36386 + (NN) -8831 + (LL) 5820
1D Compatibility (HY) -9600 + (ID) 4800
Total energy: -176729.0 ( -64.31 by residue)
QMean score : 0.396
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