Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLETPKVLLKNLQDCKIHFIGIGGIGISGL-AKYLKAQGA----KISGS--DIAISP-SVKYLKALGVEINIPHDPKAINHQDVIIHSAIIKEDNTEIQRAKELEIPILSRKDALYSILKDKRVFSVCGAHGKS-SITAMLSA-ICPAFGAIIGAHSKEFDSNVRESADMSLVFEA-DESDSSFLFSNPFCAIVPNTEPEHLEHYDHDLERFFFAYKYFLDHAQK---RVIY----KED-PFLKNYSKDAIVLEKKDIYNIQYILKDGEPY-TSFELK----NLGAFLVWGLGEHNATNASLAILSALD----ELNLEEIRNNLLNFKGIKKRFDI-LQKNNLILIDDYAHHPTEIGATLKSARIYANLLNTQEKIIVIWQAHKYSRLMDNLEEFKKCFLEHCDRLIILPV-----YSASEVKRDIDLKAHFKHYNPTFIDRVRKKGDFLELLVNDNVVETIEKGFVIGFGAGDITYQLRGEM----- |
| 2VOS Chain:A ((22-487)) | DEIASLLQVEHLLD-QRWRIDPSLTRISALMDLLGSPQRSYPSIHIAGTNGKTSVARMVDALVTALHRRTGRTTSPHLQSPVERISI-------DGKPISPAQYVATYREIEPLVALIDQQSQASP-------AMSKFEVLTAMAFAAFAD--------------APVDVAVVEVGMGGRWDATNVINAPVAVITPISIDHVDYLGADIAGIAGEKAGIITRAPSPDTVAVIGRQVPKVMEVLLAESVRADASVAREDSEFAVLRRQIAVGGQVLQLQGLGGVYSDIYLPLHGEHQAHNAVLALASVEAFFGAQLDGDAVRAGFAAVT-SPGRLERMRSAPTVFI--DAAHN----PAGASALAQTLAHEFDFRFLVGVLSVLGDKDVDGILAALEP----VFDSVVVTHNGSPRALDVEALALAAGERFGPDRVRTAENLRDAIDVATSLVDDAAADPDVAGRTGIVITGSVVTAGAARTLFGRDPQ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2VOS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -132578 for 3506 contacts (-37.8/contact) +
2D Compatibility (PS) -42955 + (NN) -4574 + (LL) 2276
1D Compatibility (HY) 2000 + (ID) 2550
Total energy: -178381.0 ( -50.88 by residue)
QMean score : 0.351
|
|
|