Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRAKMKDIYLDVEKSIKDLQSIFKNADGRDEKLKRFNQEALEVFQKLERESLKEL------ESLKN--NEEWENFTIAFYGETGAGKSTLIECLRMFFKEQSK-V--DQQ----ERFKRLYSTYQYNHQNFILLDVPG---IEGSE--KKVIDQISNATQKAHAIFMLPKRLILRKKEKKGKGERLKKSKNSLIRKQRYGRFSTNRLIAQEP |
3B60 Chain:A ((300-507)) | ---SLTNVNAQFQRGMAACQTLFAILDSEQEKDEGKR-VIDRATGDLEFRNVTFTYPGREVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGHILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEEYSREQIEEAARMAYAMDFINKMDNGLDTIIGENGVLLSGGQRQRIAIARALLRDSPILILDEA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B60.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 46667 for 1210 contacts (38.6/contact) +
2D Compatibility (PS) -19284 + (NN) 1328 + (LL) 572
1D Compatibility (HY) -4400 + (ID) 1850
Total energy: 23033.0 ( 19.04 by residue)
QMean score : 0.097
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