Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MD--------QEILDVLIVGAGPGGIATVVECEIAGVKKVLLCEKTESHSGMLEKFYKAGKRIDKDYKKQVVELKGHIPFKDSFKEETLENFTNLLKEHRITPSYKTDIESVKKE--GELFKITTTSNTTYHAKFVVVAIGKMGQPNRPTTYKIPVA--LSKQVVFSINDCKENEKTLVIGGGN-----SAVEYAIALCKTTPTTLNYRKKEFSRINEDNAKNLQEVLDNNTL-KSKLGVD---IESLE--EDNTQIKVNFTDNTSESFDRLLYAIGGSTPLEFFKRCSLELDPSTNIPVVKENLESNNIPNLFIVGDILFKSGASIATALNHGYDVAIEIAKRLQS--- |
| 4NTC Chain:A ((2-326)) | MSIGKLLSNGALLVDVLIIGAGPAGLSTATGLARQLHTAVVFDSGVYRNAKTQHMHNVLGWD------------------HRNPAELRAAGRADLTTRYSTIQFQNSTIEAIRQVETNQLFEARDNEGHSWYGRKVVLATGVRDIPLDIEGYSECWANGIYHCLFCDGYEERGQETVGVLALGPIANPARALHLARMALRLSESVTIYTNG-----NEQLAKEIQQAAEESPVGASGLKFEARPIRRFEKGDVAKTVIVHLGESESKTEGFLVYNPQTEVNGPFAKQLALNMTEGGDILTTPPFYETS-VPGVFAVGDCA-TPLKAVTPAVSMGSLAAGGLVAQLQAQAL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4NTC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -132908 for 2516 contacts (-52.8/contact) +
2D Compatibility (PS) -32180 + (NN) -9032 + (LL) 1816
1D Compatibility (HY) -8400 + (ID) 3000
Total energy: -183704.0 ( -73.01 by residue)
QMean score : 0.457
|
|
|