Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQYKIKEMPLEELEPKVVEGLLE--HK----E-----R-LGYNIPKK-DTEYIGFAALSEVGEMVGGVTAKIS------YGELHVSLLSVDPSTQGSGVGTELMAQIERYGRANSCHHISLTT--FSYQAPEFYRKCGFTELGRVKDFPIKGEEKYFFIKYL
2FE7 Chain:A ((3-156))
--LEIRPAVPADAEQILAFIIELADYERARHEVVTDVEGIRRSLFAEGSP-TRALMC-LSEGRPIGYAVFFYSYSTWLGRNGIYLEDLYVTPEYR--GAGRRLLRELAREAVANDCGRLEWSVLDWNQPAIDFYRSIGALPQDEWVRYRLDGEALRKM----
General information:
TITO was launched using:
RESULT:
Template:
2FE7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35042 for 824 contacts (-42.5/contact) +
2D Compatibility (PS) -14040 + (NN) -2237 + (LL) 944
1D Compatibility (HY) -2800 + (ID) 1150
Total energy: -54325.0 ( -65.93 by residue)
QMean score : 0.501
(partial model without unconserved sides chains):
PDB file :
Tito_2FE7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FE7-query.scw
PDB file :
Tito_Scwrl_2FE7.pdb
: