Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLTMDDIVREGHPALREVATEVTFPLSDEEKKLGRDMLEFLINSQDEDLAEKYGLRGGVGIAAPQLAVTKRFLAIHVHDEKDRLYSYVLYNPKIRSHSVQQACLSGGEGCLSVDREVPGYVVRSERVTIDAFDENGTPLKLRFKGYPAIVIQHEIDHLNGIMFYDHINKENPSYLPPDVDVFG
1LRU Chain:B ((32-147))----------------------------------------------DDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDE--RLVLINPELLEKSGETGI---EEGCLSIP-EQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLS---------------


General information:
TITO was launched using:
RESULT:

Template: 1LRU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57980 for 853 contacts (-68.0/contact) +
2D Compatibility (PS) -12530 + (NN) -3952 + (LL) 3892
1D Compatibility (HY) -12000 + (ID) 2250
Total energy: -84820.0 ( -99.44 by residue)
QMean score : 0.252

(partial model without unconserved sides chains):
PDB file : Tito_1LRU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1LRU-query.scw
PDB file : Tito_Scwrl_1LRU.pdb: