Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQEALGLVETKGLVGAIEAADAMVKSANVTLTGYEKIGSGLVTVMVRGDVGAVKAATEAGAAAAKNVGTVMSTHVIPRPHTDVEEILPVRVKSDE
4QIF Chain:E ((11-96))
-QEALGMVETKGLTAAIEAADAMVASANVMLVGYEKIGHGLVTVIVRGDVGAVKAATDAGAAAARNVGEVKAVHVIPRPHTDVEKIL--------
General information:
TITO was launched using:
RESULT:
Template:
4QIF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36140 for 666 contacts (-54.3/contact) +
2D Compatibility (PS) -9511 + (NN) -3845 + (LL) 616
1D Compatibility (HY) -9200 + (ID) 3550
Total energy: -61630.0 ( -92.54 by residue)
QMean score : 0.589
(partial model without unconserved sides chains):
PDB file :
Tito_4QIF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QIF-query.scw
PDB file :
Tito_Scwrl_4QIF.pdb
: