Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIYFDNSATTKPNAAVLETYTKVASNYFANPSSLHRFGAKSKELLDASRKQIAAMMSALPEEIIFTSGGTEGNNLAIKGLVYSYQNRGKH---IITSSIEHPSVRVVMEEL-EQEGFTVKYLPVDKNGVIKLEELKAALT--DETILVSIMGVNNEVGSIQPLQEIGEMLSVLENTFFHVDFVQAIGKIPLTLDANSIDLLTFSGHKFHALRGTGILFKRKNVHLHPEILGGGQEMGYRSGTENLAGNVALAKALRLTLE-NEPRKEALIEIRDYLLTKIAQ-MSDMTVH-TKQSVAAPHIVCFSAKGHRGEILVHALEKEDIYISTTSACSSKQKLASSTLKAMGVTDEEATGAVRVSLSYENRLSEAKIFIQKLQEIIENLNKVVK- |
| 4ISY Chain:A ((12-398)) | SAYLDHAATTPMHPAAIEAMAAVQRTI-GNASSLHTSGRSARRRIEEARELIADKLGARPSEVIFTAGGTESDNLAVKGIYWARRDAEPHRRRIVTTEVEHHAVLDSVNWLVEHEGAHVTWLPTAADGSVSATALREALQSHDDVALVSVMWANNEVGTILPIAEMSVVAMEF-GVPMHSDAIQAVGQLPLDFGASGLSAMSVAGHKFGGPPGVGALLLRRDVTCVPLMHGGGQERDIRSGTPDVASAVGMATAAQIAVDGLEENSARLRLLRDRLVEGVLAEIDDVCLNGADDPMRLAGNAHFTFRGCEGDALLMLLDANGIECSTGSP--------SHVLIAMGVDAASARGSLRLSLGHTSVEADVDAALEVLPGAVARARRAALA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ISY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -206578 for 3314 contacts (-62.3/contact) +
2D Compatibility (PS) -41037 + (NN) -24307 + (LL) 804
1D Compatibility (HY) -17200 + (ID) 6000
Total energy: -294318.0 ( -88.81 by residue)
QMean score : 0.532
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