Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIAIFASGSGSNFQALVDDEFIK-PYVKLLVCDKPNAYVLERANKHDIPVFLFEAKNYPDKEAFETEILLELRRLEIDLLVLAGYMRLIGPTLLAEFPEQIVNLHPSLLPEFKGKDAIGQAIQANVSGTGVTAHFVDAGMDTGPIIDQVKVTIETAETTDTLAEKIHQVEHIFYPKVIRGLIQNGGND
3DCJ Chain:B ((14-184))
-RLVVLASGTGSLLRSLLDAAVGDYPARVVAVGVDRECRAAEIAAEASVPVFTVRLADHPSRDAWDVAITAATAAHEPDLVVSAGFMRILGPQFLSRFYGRTLNTHPALLPAFPGTHGVADALAYGVKVTGATVHLVDAGTDTGPILAQQPVPVLDGDDEETLHERIKVTER-----------------
General information:
TITO was launched using:
RESULT:
Template:
3DCJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109893 for 1317 contacts (-83.4/contact) +
2D Compatibility (PS) -18683 + (NN) -11468 + (LL) 804
1D Compatibility (HY) -7200 + (ID) 2950
Total energy: -149390.0 ( -113.43 by residue)
QMean score : 0.504
(partial model without unconserved sides chains):
PDB file :
Tito_3DCJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DCJ-query.scw
PDB file :
Tito_Scwrl_3DCJ.pdb
: