Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEIQGLTIAYKQKVAIDNVTLQIASGKLTGIVGPNGAGKSTLLKGMMGLIPREQGQVTLADKPLT------------------YWRKKIAYVPQRSEVDLTF-PITVFDMVLLGTYPALGLIKRPGKKEKQLALDALEQVEMTGFM-KRQIGELSGGQLQRVFIARALAQHAEIFFLDEPFAGIDMTSEALIMRLLKKLRDNGKTIVVVHHDFHKVAAYFDDIILL-NKKLVAHGPVEQTFTEEKIQFAYGDAPVAFAAGV
1B0U Chain:A ((7-246))
LHVIDLHKRYGGHEVLKGVSLQARAGDVISIIGSSGSGKSTFLRCINFLEKPSEGAIIVNGQNINLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFN---LWSHMTVLENVMEAPIQVLGL---SKHDARERALKYLAKVGIDERAQGKYPVHLSGGQQQRVSIARALAMEPDVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIEEEGDPEQVFGNPQS---------------
General information:
TITO was launched using:
RESULT:
Template:
1B0U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -158538 for 1761 contacts (-90.0/contact) +
2D Compatibility (PS) -23996 + (NN) -13671 + (LL) 1680
1D Compatibility (HY) -16000 + (ID) 3150
Total energy: -213675.0 ( -121.34 by residue)
QMean score : 0.517
(partial model without unconserved sides chains):
PDB file :
Tito_1B0U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B0U-query.scw
PDB file :
Tito_Scwrl_1B0U.pdb
: