Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNAGILGVGKYVPEKIVTNFDLEKI-MDTSDEWIRTRTGIEERRIARDDEYTH-----DLAYEAAKVAIKNAGLTPDDIDLFIVATVTQEATFPSVANIIQDRLGAKNAAGMDVEAACAGFTFGVVTAAQFIKTGAYKNIVVVGADKLSKITNW-DDRTTAVLFGDGAGAVVMGPVSDDHGLLSFDLGSDGSGGKYLNLDENKK-----------IYMNGREVFRFAVRQMGEASLRVLERAGLE-KEDLDLLIPHQANIRIMEASRERLNLPEEKL--MKTVHKYGNTSSSSIALALVDAVEEGRIKDN----DNVLLVGFGGGLTWGALIIRWGK-
1UB7 Chain:A ((2-322))--SGILALGAYVPERVMTNADFEAYL-DTSDEWIVTRTGIKERRVAAE-----DEYTSDLAFKAVEDLLRRHPGALEGVDAVIVATNTPDALFPDTAALVQARFGLK-AFAYDLLAGCPGWIYALAQAHALVEAGLAQKVLAVGAEALSKIIDWN-DRATAVLFGDGGGAAVVGKVREGYGFRSFVLGADGTGAKELYHACVAPRLPDGTSMKNRLYMNGREVFKFAVRVMNTATLEAIEKAGL-TPEDIRLFVPHQANLRIIDAARERLGLPWER-VA-VNVDRYGNTSTASIPLALKEAVDA----GRIREGDHVLLVSFGAGLTWAAAVLTWGGA


General information:
TITO was launched using:
RESULT:

Template: 1UB7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -181560 for 2741 contacts (-66.2/contact) +
2D Compatibility (PS) -31988 + (NN) -14550 + (LL) 1080
1D Compatibility (HY) -27200 + (ID) 7500
Total energy: -261718.0 ( -95.48 by residue)
QMean score : 0.565

(partial model without unconserved sides chains):
PDB file : Tito_1UB7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1UB7-query.scw
PDB file : Tito_Scwrl_1UB7.pdb: