Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNAGILGVGKYVPEKIVTNFDLEKI-MDTSDEWIRTRTGIEERRIARDDEYTH-----DLAYEAAKVAIKNAGLTPDDIDLFIVATVTQEATFPSVANIIQDRLGAKNAAGMDVEAACAGFTFGVVTAAQFIKTGAYKNIVVVGADKLSKITNW-DDRTTAVLFGDGAGAVVMGPVSDDHGLLSFDLGSDGSGGKYLNLDENKK-----------IYMNGREVFRFAVRQMGEASLRVLERAGLE-KEDLDLLIPHQANIRIMEASRERLNLPEEKL--MKTVHKYGNTSSSSIALALVDAVEEGRIKDN----DNVLLVGFGGGLTWGALIIRWGK- |
1UB7 Chain:A ((2-322)) | --SGILALGAYVPERVMTNADFEAYL-DTSDEWIVTRTGIKERRVAAE-----DEYTSDLAFKAVEDLLRRHPGALEGVDAVIVATNTPDALFPDTAALVQARFGLK-AFAYDLLAGCPGWIYALAQAHALVEAGLAQKVLAVGAEALSKIIDWN-DRATAVLFGDGGGAAVVGKVREGYGFRSFVLGADGTGAKELYHACVAPRLPDGTSMKNRLYMNGREVFKFAVRVMNTATLEAIEKAGL-TPEDIRLFVPHQANLRIIDAARERLGLPWER-VA-VNVDRYGNTSTASIPLALKEAVDA----GRIREGDHVLLVSFGAGLTWAAAVLTWGGA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UB7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -181560 for 2741 contacts (-66.2/contact) +
2D Compatibility (PS) -31988 + (NN) -14550 + (LL) 1080
1D Compatibility (HY) -27200 + (ID) 7500
Total energy: -261718.0 ( -95.48 by residue)
QMean score : 0.565
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