Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LKLIFAIVQDQDSNRLSDALTKGNF-GATKLATTGG---------FL------K-AGNTTFIIGTEDERVEDALAIIKENCKAREQMMTPSASLGVTVDTYVPYPIEVQVGGATVFVMPVESFHHF
2J9C Chain:A ((3-103))
MKKVEAIIRPEKLEIVKKALSDAGYVGMTVSEVKGRGVQGGIVERYRGREYIVDLIPKVKIELVVKEEDVDNVIDIICENART-G-----------------------NPGDGKIFVIPVERVVR-
General information:
TITO was launched using:
RESULT:
Template:
2J9C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43917 for 549 contacts (-80.0/contact) +
2D Compatibility (PS) -9253 + (NN) -3847 + (LL) 1780
1D Compatibility (HY) -5200 + (ID) 1000
Total energy: -61437.0 ( -111.91 by residue)
QMean score : 0.559
(partial model without unconserved sides chains):
PDB file :
Tito_2J9C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2J9C-query.scw
PDB file :
Tito_Scwrl_2J9C.pdb
: