Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLENDIKKVLYSEEDIILKTKELGAKLTADYAGK------NPL-LVGVLKGSVPFMAELLKHI---DTHVEIDFMVVSSYHGGTTSSGEVKILKDVDTNIEGRDVIFIEDIIDTGRTLKYLRDMFKYRQANSVKVATLFDKPEGRLVDIDADYVCYDIPNEFIVGFGLDYAENYRNLPYVGVLKEEIYSK
1I0I Chain:A ((9-191))
------EKILFTEEEIRTRIKEVAKRIADDYKGKGLRPYVNPLVLISVLKGSFMFTADLCRALCDFNVPVRMEFICVSSYGEGLTSSGQVRMLLDTRHSIEGHHVLIVEDIVQTALTLNYLYHMYFTRRPASLKTVVLLDKREGRRVPFSADYVVANIPNAFVIGYGLDYDDTYRELRDIVVLRPEVYA-
General information:
TITO was launched using:
RESULT:
Template:
1I0I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -119219 for 1314 contacts (-90.7/contact) +
2D Compatibility (PS) -19011 + (NN) -6476 + (LL) 600
1D Compatibility (HY) -20800 + (ID) 4000
Total energy: -168906.0 ( -128.54 by residue)
QMean score : 0.543
(partial model without unconserved sides chains):
PDB file :
Tito_1I0I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1I0I-query.scw
PDB file :
Tito_Scwrl_1I0I.pdb
: