Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNNTEFYDRLGVSKDASQDEIKKAYRRMSKKYHPDINKETGAEEKYKEVQEAYETLSDTQKRAAYDQYGAAGANGGFGGFDGGGFGGFDGGGFGGFEDIFSSFFGGGGMRNPNAPRQGDDLQYRVNLSFEEAIFGAEKEVSYNRESSCHTCSGSGAKPGTSPVTCQKCHGSGVINVDTQTPLGTMRRQVTCDVCQGSGQEIKEKCPTCHGTGHEKKTHKVSVKIPAGVETGQQIRLTGQGEAGFNGGPYGDLFVIINVLPSQQFERNGSTIYYTLKISFVQAALGDTIDIPTVHGA-VEMSIPAGTQTGKTFRLRGKGAPKLRG-GGQGDQHVTVNIVTPTKLNDAQKEALHAFAEASGDKMVHPKKKGFFDKVKDALDVD |
| 2Q2G Chain:A ((4-179)) | ----------------------------------------------------------------------------------------------------------------------RSHEVPLLVTLEELYLGKRKKIKVTRKRFIEH-------------------------------------------------------------KVRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDLVLIIQTKTHPRFTRDDCHLIMKVTIPLVRALTGFTCPVTTLDNRNLQIPIKEIVNPKTRKIVPNEGMPIKNQPGQKGDLILEFDICFPKSLTPEQKKLIKEAL-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Q2G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -44692 for 1088 contacts (-41.1/contact) +
2D Compatibility (PS) -18837 + (NN) -6313 + (LL) 5360
1D Compatibility (HY) -12800 + (ID) 1850
Total energy: -79132.0 ( -72.73 by residue)
QMean score : 0.496
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