Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNIVIIGSISMDLVMETNRIAKEGETVFGQR-FSMVPGGKGANQAVAIGRLSQDRDNITILGAIGEDSFGPILLDNLNKNHVTTDFVGTIP-SSSGVAQITL-YNNDNRIIYCPGANGKVDTKKWSQEWSIIKEADLVVLQNEIPHQANMKIANFCKEHSIKLLYNPAPSRKTDIEMLDKVDYFTPNEHECQELFPNQK---------LEDILATYPEKLIVTLGTKGAIYSDGKESHLIPALETKAVDTTGAGDTFNGAFGYAISKK-FKIANALRFATLAAHLSVQKFGAQGGMPTIKEMEDNQHYEKDWHIK |
| 3RY7 Chain:A ((2-303)) | TNKVVILGSTNVDQFLTVERYAQPGETLHVEEAQKAFGGGKGANQAIATARMQ-A--DTTFITKIGTDGVADFILEDFKVAHIDTSYIIKTAEAKTGQAFITVNAEGQNTIYVYGGANMTMTPEDVINAKDAIINADFVVAQLEVPIPAIISAFEIAKAHGVTTVLNPAPAKALPNELLSLIDIIVPNETEAELLSGIKVTNEQSMKDNANYFLSIGIKTVLITLGKQGTYFATKNQSQHIEAYKVNAIDTTAAGDTFIGAFVSRLNKSQDNLADAIDFGNKASSLTVQKHGAQASIPLLEEVNQV---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RY7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -111530 for 2465 contacts (-45.2/contact) +
2D Compatibility (PS) -31677 + (NN) -15566 + (LL) 816
1D Compatibility (HY) -16800 + (ID) 4650
Total energy: -179407.0 ( -72.78 by residue)
QMean score : 0.386
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