Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKGLMISFEGPDGAGKTTVLEAVLPLLREKLSQDILTTREPGGVTISEEIRHIILDVKHT--QMDKKTELLLYMAARRQHLVEKVL-PALEEGKIVLMDRFIDSSVAYQGSGRGLDKSHIKWLNDYATDSHKPDLTLYFDVPSEVGLERIQKSVQREVNRLDLEQLDMHQRVRQGYLELADSEPNRIVTIDASQQLDEVIAETFSIILDRINQ
3LV8 Chain:A ((29-232))-----FIVIEGLEGAGKSTAIQVVVETLQQNGIDHITRTREPGGTLLAEKLRALVKE-EHPGEELQDITELLLVYAARVQ-LVENVIKPALARGEWVVGDRHDMSSQAYQGGGRQIAPSTMQSLKQTALGDFKPDLTLYLDIDPKLGLER-------ELDRIEKMDISFFERARERYLELANSD-DSVVMIDAAQSIEQVTADIRRALQDWLSQ


General information:
TITO was launched using:
RESULT:

Template: 3LV8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72267 for 1553 contacts (-46.5/contact) +
2D Compatibility (PS) -21690 + (NN) -12420 + (LL) 1208
1D Compatibility (HY) -13200 + (ID) 4100
Total energy: -122469.0 ( -78.86 by residue)
QMean score : 0.537

(partial model without unconserved sides chains):
PDB file : Tito_3LV8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3LV8-query.scw
PDB file : Tito_Scwrl_3LV8.pdb: