Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------MKIALINENSQASKNTIIYK-----------ELKAVSDEKGFEVFNYGMYGKEEESQLTYVQNGLLTAILLNSGAADFVITGCGTGIGAMLACNSFPGVVCGFAADPVD----AYLFSQVNGGNALSLPFAK--------GFGWGAELNLRYLFERLFEDEKGGGYPKERA--------------VPEQRNARILSEIK--QITYRDL----------LSVLKEIDQDFLKETISGEH-------------FQEYFFANCQNQNIADYLKSVLD--- |
| 1THT Chain:A ((4-305)) | QCKTIAHVLRVNNGQELHVWETPPKENVPFKNNTILIASGFARRMDHFAGLAEYLSTNGFHVFRYDSLHHVEFT-MTTGKNSLCTVYHWLQTKGTQNIGLIAASLSARVAYEVISDLELSFLITAVGVVNLRDTLEKALGFDYLSLPIDELPNDLDFEGHKLGSEVFVRDCFEHHWDTLDSTLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSLLGSSHDLGENLVVLRNFYQSVTKAAIAMDGGSLEIDVDFIEPDFEQLTIATVNERRLKAEIENRTPEMA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1THT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41171 for 1441 contacts (-28.6/contact) +
2D Compatibility (PS) -22593 + (NN) -10128 + (LL) 120
1D Compatibility (HY) -12800 + (ID) 2200
Total energy: -88772.0 ( -61.60 by residue)
QMean score : 0.254
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