Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNIKKCKQLLMSLVVLTLAVTCLAPMSKAKAASDPIDINASAAIMIEASSGKILYSKNADKRLPIASMTKMMTEYLLLEAIDQGKVKWDQTYTPDDYVYEISQDNSLSNVPLRKDGKYTVKELYQATAIYSANAAAIAIAEIVAGSETKFVEKMNAKAKELGLTDYKFVNATGLENKDLHGHQPEGTSVNEESEVSAKDMAVLADHLITDYPEILETSSIAKTKFREGTDDEMDMPNWNFMLKGLVSEYKKATVDGLKTGSTDSAGSCFTGTAERNGMRVITVVLNAKGNL--HTGRFDETKKMFDYAFDNFSMKEIYAEGDQVKGHK--TISVDKGKEKEVGIVTNKAFSLPVKN-GEEKNYKAKVT-LNKDNLTAPVKKGTKVGKLTAEYTGDEKDYGFL-----NSDLAGVDLVTKENVEKANWFVLTMRSIGGFFAGIWGSIVDTVTGWF |
| 1XP4 Chain:A ((10-378)) | -----------------------------------FTIAAKHAIAVEANTGKILYEKDATQPVEIASITKLITVYLVYEALENGSITLSTPVDISDYPYQLTTNSEASNIPME-ARNYTVEELLEATLVSSANSAAIALAEKIAGSEKDFVDMMRAKLLEWGIQDATVVNTTGLNNETLGDNIYPGSKKDEENKLSAYDVAIVARNLIKKYPQVLEITKKPSSTFAG-----MTITSTNYMLEGMPAYRG--GFDGLKTGTTDKAGESFVGTTVEKGMRVITVVLNADHQDNNPYARFTATSSLMDYISSTFTLRKIVQQGDA---YQDSKAPVQDGKEDTVIAVAPEDIYLIERVGNQS-SQSVQFTPD-SKAIPAPLEAGTVVGHLTYED-K-----DLIGQGYITTERPSFEMVADKKIE------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XP4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109506 for 3103 contacts (-35.3/contact) +
2D Compatibility (PS) -38473 + (NN) -9338 + (LL) 5752
1D Compatibility (HY) -28000 + (ID) 6850
Total energy: -186415.0 ( -60.08 by residue)
QMean score : 0.566
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